Single-cell optical phenotyping for diffuse gliomas using artificial intelligence and label-free microscopy
Project Number1F31NS135973-01
Contact PI/Project LeaderJIANG, CHENG
Awardee OrganizationUNIVERSITY OF MICHIGAN AT ANN ARBOR
Description
Abstract Text
ABSTRACT
Label-free optical microscopy has emerged as a promising method for rapid imaging of fresh, unprocessed
surgical specimens. Stimulated Raman histology (SRH) – a label-free, non-destructive, high-sensitivity optical
imaging method – combined with artificial intelligence (AI) has been used for bedside brain tumor diagnosis,
margin delineation, and molecular genetic prediction. Previous AI methods are limited because they rely on
weak, slide- or patient-level annotations for model training. Importantly, these annotations fail to capture the
cellular complexity and spatial heterogeneity found in diffuse gliomas, the most common and deadly primary
brain tumor. A major barrier to advancing the role of label-free optical imaging in diffuse glioma research and
patient treatment is developing strategies to allow AI-based computer vision models to learn rich, high-
resolution, single-cell optical image features, which allow for a more complete description of the underlying
tumor biology. The objective of this research is to determine if an AI-based computer vision system can learn
single-cell optical image features. I will (1) detect single cells in diffuse glioma specimens imaged using SRH;
(2) optimize learned single-cell features using representative single-cell examples, which we call exemplar
learning; and (3) identify patient-level clusters based on optical single-cell features. Successful completion of
this proposal will reduce the reliance of AI on weak annotations, and advance the role of AI in diffuse glioma
research and treatment via single-cell optical features and patient-level clusters. In the long term, AI methods
in this proposal can be integrated with the diagnosis workflow using optical imaging, and provide physicians
with additional tools to further differentiate diffuse gliomas, and enable better and more personalized care.
Public Health Relevance Statement
PROJECT NARRATIVE
Label-free optical microscopy, combined with artificial intelligence (AI), has emerged as a promising method for
the rapid imaging of fresh, unprocessed surgical specimens, bedside brain tumor diagnosis, margin
delineation, and molecular genetic prediction. Existing AI methodologies are limited because they rely on
weak, slide- or patient-level annotations for model training, and are therefore unable to capture the cellular
complexity and spatial heterogeneity found in diffuse gliomas. The objective of this research is to develop an
innovative AI-based system to learn single-cell optical image features and identify patient-level clusters,
without weak supervision, in order to advance the role of AI in diffuse glioma research and enable better, and
more personalized care.
National Institute of Neurological Disorders and Stroke
CFDA Code
853
DUNS Number
073133571
UEI
GNJ7BBP73WE9
Project Start Date
01-January-2024
Project End Date
31-December-2026
Budget Start Date
01-January-2024
Budget End Date
31-December-2024
Project Funding Information for 2024
Total Funding
$42,099
Direct Costs
$42,099
Indirect Costs
Year
Funding IC
FY Total Cost by IC
2024
National Institute of Neurological Disorders and Stroke
$42,099
Year
Funding IC
FY Total Cost by IC
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