MoTrPAC Genomics, Epigenomics and Transcriptomics Chemical Analysis Site
Project Number2U24DK112331-07
Former Number5U24DK112331-06
Contact PI/Project LeaderSEALFON, STUART C. Other PIs
Awardee OrganizationICAHN SCHOOL OF MEDICINE AT MOUNT SINAI
Description
Abstract Text
Project Summary
Physical activity (PA) has been shown to improve the overall health of human beings. The molecular mechanisms
responsible for the diverse benefits of PA are not well understood. The Molecular Transducers of Physical Activity
Consortium (MoTrPAC) is being formed to advance knowledge in this area. We propose to conduct
comprehensive analyses of the MoTrPAC human PA intervention samples, contribute these data to public
databases, help identify candidate molecular transducers of PA and elucidate new PA response mechanisms,
and help develop predictive models of the individual response to PA. The Genomic, Epigenomic, and
Transcriptomic assay site at Icahn School of Medicine at Mount Sinai and New York Genome Center (ISMMS
GET) provide the infrastructure, assay and analysis expertise and experience to support this large-scale,
comprehensive analysis of molecular changes associated with endurance and resistance exercise. ISMMS GET
aims are to 1. Work with the MoTrPAC Steering Committee and Biospecimens Committee to finalize analysis
plans and protocols for randomized human clinical trial study; 2. Generate high throughput GET data such as
high-depth RNA-seq and Whole Genome Sequencing (WGS), supplemented by additional assay types such as
ATAC-seq, Iso-Seq, and CITE-seq based on clinical human samples; 3. QC data and transfer to MoTrPAC
Bioinformatics Center (BIC) and perform initial analyses to help ensure data quality; 4. Collaborate with BIC and
other MoTrPAC sites to analyze animal and human data from GET and other MoTrPAC analysis sites to identify
candidate PA transducers and molecular mechanisms; 5. Integrate various omics data and develop predictive
models of PA capacity and response to training in humans; 6. Participate in the preparation of manuscripts and
presentations and make the results of the study available to the public using peer-reviewed publications in
scientific journals; 7. Make data generated in the study available to the scientific community through MoTrPAC
DataHub and Gene Expression Omnibus. The success of GET Sites and the MoTrPAC program will transform
insight into the molecular networks that transduce PA into health, create an unparalleled comprehensive public
PA data resource, and can provide the foundation for profound advances in the prevention and treatment of
many major human diseases.
Public Health Relevance Statement
Project Narrative
While physical activity prevents or improves many diseases, the chemical changes that occur in the body and
lead to better health are not well known. As a part of a consortium of physical activity research programs
working together, we will use advanced technologies to comprehensively study the changes in genes and gene
products caused by physical activity. This study can potentially lead to advances in preventing and treating
many diseases using physical activity.
National Institute of Diabetes and Digestive and Kidney Diseases
CFDA Code
310
DUNS Number
078861598
UEI
C8H9CNG1VBD9
Project Start Date
08-December-2016
Project End Date
31-May-2027
Budget Start Date
15-August-2024
Budget End Date
31-May-2025
Project Funding Information for 2024
Total Funding
$1
Direct Costs
$3,038,283
Indirect Costs
$1,795,469
Year
Funding IC
FY Total Cost by IC
2024
NIH Office of the Director
$1
Year
Funding IC
FY Total Cost by IC
Sub Projects
No Sub Projects information available for 2U24DK112331-07
Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
No Publications available for 2U24DK112331-07
Patents
No Patents information available for 2U24DK112331-07
Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
No Outcomes available for 2U24DK112331-07
Clinical Studies
No Clinical Studies information available for 2U24DK112331-07
News and More
Related News Releases
No news release information available for 2U24DK112331-07
History
No Historical information available for 2U24DK112331-07
Similar Projects
No Similar Projects information available for 2U24DK112331-07