Targeted Degradation of Extracellular Proteins to Enhance Brain Plasticity
Project Number1DP1NS142487-01
Former Number1DP1OD037204-01
Contact PI/Project LeaderALLEN, NICOLA J
Awardee OrganizationSALK INSTITUTE FOR BIOLOGICAL STUDIES
Description
Abstract Text
PROJECT SUMMARY
The young brain displays remarkable plasticity. This includes an ability to remodel neuronal synaptic connections
to learn new tasks in health, as well as being able to repair connections and restore function after injury. In the
adult brain there are active mechanisms in place that maintain neuronal circuit connectivity and synaptic stability,
which is necessary for typical brain function, but acts as a barrier to targeted synaptic remodeling in situations
where this is beneficial, for example to enhance learning, or to repair neurons after injury. Removal of factors
from the adult brain that limit plasticity is sufficient to enable enhanced remodeling and repair. However, these
manipulations lead to a permanent reopening of plasticity states, which is detrimental to long-term brain function
by non-specifically destabilizing synaptic connections. Therefore, new approaches are needed to transiently
enhance neuronal plasticity state to enable controlled synaptic remodeling and repair. There is compelling
evidence that manipulating proteins in the extracellular space surrounding neurons is sufficient to enhance
plasticity and synaptic remodeling. For example, proteins secreted by non-neuronal glial cells, specifically
astrocytes, are sufficient to induce synapse maturation and stabilization, and permanent removal of these factors
from adult astrocytes enables enhanced plasticity and repair. This demonstrates a role for specific secreted
proteins in repressing plasticity in the adult brain, suggesting their targeted removal may be beneficial. Therefore,
the first goal of this proposal is to ask if acute degradation of specific extracellular proteins is able to reopen brief,
controlled, windows of plasticity to enable enhanced learning or to promote synaptic repair after injury. This will
be achieved by developing a genetically encoded system for Targeted Degradation of Extracellular Proteins
(TDEP). TDEP will use nanobodies that bind the protein of interest, coupled to a degradation-targeting sequence
for uptake and removal by endogenous brain cells. As proof-of-concept TDEP will be developed to degrade
known astrocyte-secreted proteins that stabilize synapses, and determine whether acute protein degradation is
sufficient to reopen transient windows of synaptic plasticity, assayed using visual system plasticity, injury models
and learning and memory paradigms. The second goal is to identify the complete repertoire of extracellular
proteins that contribute to repressing plasticity in adulthood, and their cellular source, to enable their precise
targeting for degradation and plasticity enhancement. This will be achieved by labeling newly-synthesized
proteins secreted from specific brain cells under different plasticity conditions, using proximity labeling of proteins
with biotin by the enzyme TurboID, targeted to different subcellular compartments from which extracellular
proteins originate. This will generate an atlas of the cellular origin of extracellular proteins, and will be used to
identify candidates for TDEP targeting for plasticity enhancement. The outcome will be a toolkit of genetic
reagents that enable precise control of the neuronal environment to promote brain health and repair, with lasting
impact on multiple areas of neuroscience where enhancing brain plasticity would improve function.
Public Health Relevance Statement
PROJECT NARRATIVE
The adult brain shows limited plasticity, which poses a challenge for learning new tasks in health, and for
repairing neuronal connections after injury such as stroke, or in neurodegenerative disorders such as Alzheimer’s
disease. Most current approaches to increase plasticity cause permanent alteration of neuronal state, with
potential for detrimental outcomes, therefore new approaches are needed to transiently alter neuronal plasticity
state to enable controlled synaptic remodeling and repair. This is achieved by developing Targeted Degradation
of Extracellular Proteins (TDEP), a toolkit of genetic reagents to enable precise control of the neuronal
environment to promote brain health and repair that can be applied to multiple neurological disorders where
enhancing synaptic plasticity would be beneficial.
National Institute of Neurological Disorders and Stroke
CFDA Code
310
DUNS Number
078731668
UEI
NNJ6BMBTFGN5
Project Start Date
12-September-2024
Project End Date
31-August-2029
Budget Start Date
12-September-2024
Budget End Date
31-August-2025
Project Funding Information for 2024
Total Funding
$1,330,000
Direct Costs
$700,000
Indirect Costs
$630,000
Year
Funding IC
FY Total Cost by IC
2024
NIH Office of the Director
$1,330,000
Year
Funding IC
FY Total Cost by IC
Sub Projects
No Sub Projects information available for 1DP1NS142487-01
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