3D dynamic contrast optical coherence microscopy for organoid studies
Project Number1R01EB036005-01
Contact PI/Project LeaderHUANG, SHU-WEI
Awardee OrganizationUNIVERSITY OF COLORADO
Description
Abstract Text
PROJECT SUMMARY
Optical coherence tomography (OCT) is an emerging biomedical imaging technology that provides label-free
and depth-resolved images with micron-scale spatial resolution and sub-millisecond temporal resolution. Since
its inception in 1991, OCT has revolutionized eye disease diagnosis with over 32 million ophthalmic OCT
procedures performed world-wide annually. OCT-based technologies have also been exponentially adopted in
a wide range of clinical applications, including cardiology, endoscopy, urology, dermatology, and dentistry.
Traditionally, OCT only provides tissue-level morphological information. Recently, there is a surge in
extending this label-free technology to also delineate the physiological information (e.g., cellular viability, necrotic
regions, and growth dynamics) at the cellular level. The so-called dynamic contrast microscopic OCT (DyC-
µOCT) or dynamic contrast optical coherence microscopy (DyC-OCM) is distinguished from traditional
scattering-based OCT by its emphasis on dynamic fluctuations: the motions of viable cells are accented against
the motionless regions in the OCT images, enhancing the image contrast and revealing both cellular
morphological and physiological information.
Today, there are two dominating DyC-OCM architectures: spectral-domain OCM (SD-OCM) and full-field
OCM (FF-OCM), each optimized for temporal analysis of different 2D images. Unfortunately, none of the two
dominating DyC-OCM architectures can support the 3D volumetric dynamic contrast analysis even though
organelles and cells are naturally organized in 3D. This limitation mainly comes from the fact that both SD-OCM
and FF-OCM can only provide a voxel rate of ~100 Mvoxel/s but a voxel rate exceeding 1 Gvoxel/s is necessary
for 3D DyC-OCM. Such a high voxel rate has ever only been demonstrated with another OCM architecture,
swept source OCM (SS-OCM). Even though SS-OCM can break through the voxel rate barrier, it suffers from
poor axial resolution, and thus its ability to image cellular structure has been severely limited.
In this program, we aim to develop the first 3D DyC-OCM technology that simultaneously breaks through the
voxel rate and axial resolution barriers. We will accomplish the goal by introducing several key innovations in
photonic integrated circuit technology to develop a novel swept source architecture (Aim 1) and a scalable
parallel imaging platform (Aim 2). A dual-modality imaging system consisting of a widefield fluorescence
microscope and the 3D DyC-OCM will be developed (Aim 3). Validation experiments will be conducted using in
vitro 3D human heart and intestinal organoids (hHO and hIO, Aim 4). Given the non-invasive nature of 3D DyC-
OCM, together with its high penetration and resolution, we expect to obtain a host of new information on the
dynamics of hHO and hIO development over time. This information will be valuable to evaluate how similar (or
dissimilar) in vitro organoid development is to embryonic and fetal heart and intestine development and guide
new interventions to improve organoid modeling of human development.
Public Health Relevance Statement
PROJECT NARRATIVE
Dynamic contrast optical coherence microscopy (DyC-OCM) is distinguished from traditional scattering-based
OCT by its emphasis on dynamic fluctuations: the motions of viable cells are accented against the motionless
regions in the OCT images, enhancing the image contrast and revealing both cellular morphological and
physiological information. In this program, we aim to develop the first 3D DyC-OCM technology that
simultaneously breaks through the voxel rate and resolution barriers. We will accomplish the goal by developing
a novel swept source architecture and a scalable parallel imaging platform.
National Institute of Biomedical Imaging and Bioengineering
CFDA Code
286
DUNS Number
007431505
UEI
SPVKK1RC2MZ3
Project Start Date
01-August-2024
Project End Date
30-June-2028
Budget Start Date
01-August-2024
Budget End Date
30-June-2025
Project Funding Information for 2024
Total Funding
$402,135
Direct Costs
$318,258
Indirect Costs
$83,877
Year
Funding IC
FY Total Cost by IC
2024
National Institute of Biomedical Imaging and Bioengineering
$402,135
Year
Funding IC
FY Total Cost by IC
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