Photodamage to DNA results in mutagenesis and cell death. In humans this
damage can result in skin cancer. Repair of DNA photolesions is
essential for the survival of living systems in sunlight and involves
either an excision or in situ repair of the lesion. In this proposal,
studies designed to elucidate the enzymatic mechanism of the in situ
repair of the cyclobutane pyrimidine photodimer and the spore product are
described.
The major DNA damage caused by UV irradiation of bacteria is the
cyclobutane thymine dimer. DNA photolyase catalyzes the in situ repair
of this lesion in a light-dependent reaction. To conclude our
mechanistic studies on this enzyme, we propose to further explore the use
of iodomethyl substituted photodimers as probes for radical intermediates
and to overexpress the Salmonella typhimurium photolyase for
crystallographic studies.
In contrast to bacterial DNA, UV irradiation of bacterial spores results
in the formation of the spore product as the major lesion. We will
develop a simple model system for the conversion of bis-thymines to spore
product. We will develop a synthetic route to the dinucleotide spore
product and incorporate this into short oligonucleotides to determine the
minimum substrate required for the repair enzyme. we will explore the
mechanism of spore product formation and repair using a combination of
stereochemical, isotope effect and radical or carbanion trapping studies.
No Sub Projects information available for 5R01GM040498-06
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