GENETIC MAPPING AND DNA STRUCTURE OF HUMAN CHROMOSOME 11
Project Number5R01HG000299-15
Former Number5R01GM027882-11
Contact PI/Project LeaderHOUSMAN, DAVID
Awardee OrganizationMASSACHUSETTS INSTITUTE OF TECHNOLOGY
Description
Abstract Text
During the next granting period, our goals will focus on the utilization
of the cloned genomic DNA sequences in YAC contigs from the short arm of
chromosome 11 to develop a detailed map of expressed genes for this
chromosome arm. In order to carry out this objective our specific goals
will be as follows:
1. We will complete YAC contig generation for the short arm of chromosome
11. To achieve this goal we will continue to implement the alu pcr based
filter hybridization strategy we have devised to achieve a high level of
efficiency and economy in YAC contig building.
2. We will characterize the genomic DNA isolated by the YAC cloning to
verify the accuracy with which genomic DNA sequences from human DNA are
represented in the YACs
3. We will utilize DNA from 11p YAC contigs to identify sequences of
expressed genes in the genomic DNA of this chromosome arm. To achieve
this objective efficiently we will continue to implement the exon
amplification methodology we developed during the previous granting
period.
4. We will isolate cDNAs for each expressed gene we identify. To
facilitate this goal we will implement pcr based cDNA library screening
strategies to maximize efficiency of library screening.
5. We will attempt to develop and implement an efficient strategy for
obtaining full length cDNA coverage for each gene.
6. We will carry out sequence analysis of cDNAs and corresponding
segments of genomic DNA.
7. We will develop YAC contigs in the mouse for the genomic regions
homologous to the 11p regions on which we have focused. We will utilize
these YAC contigs in order to develop a comparative map of expressed
genes for the syntenic chromosome segments between the two species.
No Sub Projects information available for 5R01HG000299-15
Publications
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Clinical Studies
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