MOLECULAR MECHANISMS OF RETINA SPECIFIC GENE EXPRESSION
Project Number5R01EY011115-02
Contact PI/Project LeaderSWAROOP, ANAND
Awardee OrganizationUNIVERSITY OF MICHIGAN AT ANN ARBOR
Description
Abstract Text
Differential expression of genes in a particular tissue, such as
retina, is achieved by combinatoriaI action of transcription factors.
Nrl is an evolutionarily-conserved bZIP transcription factor,
identified in our laboratory by subtraction cloning. In the adult, high
levels of Nrl transcripts are detected only in the retina. The Nrl
protein shows strong homology to the product of a transforming
oncogene, v-maf. The proteins of the Maf-Nrl subfamily recognize a long
AP-1 like DNA sequence element, are shown to heterodimerize with
selected bZIP proteins in vitro, and implicated in tissue-specific gene
regulation. Several lines of evidence suggest that Nrl is involved in
rhodopsin gene regulation. The underlying hypothesis is that in the
adult retina Nrl plays a major role in regulating the expression of
gene products that are needed for the appropriate fiinctioning of
photoreceptors and other neurons. Since protein-protein interactions
are a major determinant of transcriptional activity and can generate
tremendous flexibility in target site selection, the objective of this
proposal is to identify the proteins that specifically interact with
Nrl and to elucidate the biological relevance of these interactions.
To accomplish this, Specific Aim 1 proposes to evaluate whether any of
the known bZIP proteins of the Fos, Jun, Maf-Nrl and NF-E2 p45
subfamilies is expressed in the adult retina and interacts with Nrl to
modulate gene expression. Specific Aim 2 focuses on the purification
and characterization of retinal proteins that bind to the Nrl-response
element in the rhodopsin promoter. Specific Aim 3 employs a yeast two-
hybrid approach with the "Nrl-bZIP bait" to identify the proteins that
productively heterodimerize with Nrl and may be involved in regulating
different sets of genes in the retina.
The long-term objective of P.I.'s research is to understand the
molecular events involved in the pathogenesis of eye diseases and
eventually assist in the design of gene-based therapeutic strategies.
Transcription factors have become attractive targets for mechanism-
based design of drugs, which can be used to modulate specific
biochemical pathways. In that direction, the proposed studies are
designed to identify transcriptional regulatory proteins that together
with Nrl mediate tissue- or cell type- specific gene expression in the
retina, and should provide mechanistic insights into the molecular
basis of congenital and inherited retinal disorders.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
DNA binding proteinRNase protection assaySDS polyacrylamide gel electrophoresisaffinity chromatographycell typecongenital eye disordergel mobility shift assaygene expressionimmunoprecipitationin situ hybridizationmolecular cloningmolecular geneticsmolecular pathologynorthern blottingspolymerase chain reactionprotein purificationprotein structure functionretinaretina disorderrhodopsintissue /cell culturetranscription factorwestern blottingsyeast two hybrid system
No Sub Projects information available for 5R01EY011115-02
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