This is a competitive renewal application of a project to identify
susceptibility loci for infantile autism. Autism is a severe
neurodevelopmental disorder with onset usually in the first three
years of life. It is characterized by marked social deficits, delay
in language development, and a restricted range of stereotyped
repetitive behaviors. The prevalence of autism is about 1 in 2,500
births, and the ratio of affected boys to girls is around 3:1.
Although the exact causes of autism are unknown in most cases, family
and twin studies strongly support a genetic etiology.
Although the family studies strongly support a genetic etiology the
very high ratio of MZ to DZ (or sib) concordance is very indicative
of multiple Loci with interactive effects. However, given the very
high overall ratio of sib recurrence to population prevalence
(approximately 75-fold), there is considerable power to detect
susceptibility loci even if there are many of them. Thus, we are
employing an affected sib pair strategy and an entire genome screen
to search for as many contributing susceptibility loci as can be
identified. In the process, we will produce an exclusion map to
define all regions that contain no such loci.
In the initial phase of this project we have already collected and
immortalized cell lines from 80 affected sib-pair families including
parents. We now propose to complete the family
recruitment/assessment to obtain a total of 200 families with at
least two affected sibs, including immortalization of cell lines. We
intend to genotype 100 of these families with 330 highly polymorphic
markers (PIC = 0.70) spaced 10 cm apart covering the entire genome
and construct an exclusion map using multipoint sib-pair analysis.
Regions not excluded will be saturated with additional polymorphic
markers and genotyped these 100 and the second set of 100 families.
Thus, we will exclude previously unexcluded regions, as well as
identify a region or regions likely to contain a susceptibility locus
or loci. For the latter, will define 95% confidence regions to
contain a susceptibility locus. In these regions, using markers
spaced approximately 1 Cm apart, we will search for linkage
disequilibrium to further localize any susceptibility loci, and set
the stage for positionally cloning these genes.
Autism is a devastating neuro-psychiatric disorder that creates
suffering for those affected as well as their family members. By
identifying susceptibility genes, we hope to eventually understand
the pathophysiological pathways underlying this disease, leading to
effective prevention and/or treatments.
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