RAMAN INVESTIGATIONS OF THE MOLECULAR BASIS OF VISION
Project Number5R01EY002051-12
Contact PI/Project LeaderMATHIES, RICHARD A
Awardee OrganizationUNIVERSITY OF CALIFORNIA BERKELEY
Description
Abstract Text
Our long-term goal is to determine the molecular mechanism for the
photochemical events in visual excitation. We want to understand how
rhodopsin shifts the absorption maximum of its 11-cis retinal protonated
Schiff base chromophore from 440 nm to 500 nm in rod pigments, and how this
interaction is altered in blue and red cone pigments. The mechanism of the
11-cis yield 11-trans photoisomerization and of energy storage in the
primary photoproduct, bathorhodopsin, will also be determined. These goals
will be addressed by using resonance Raman scattering to obtain vibrational
spectra of the protein bound chromophore. Vibrational analyses will then
be used to determine chromophore structure. The specific aims are: 1)
Resonance Raman spectra will be obtained of rhodopsin, isorhodopsin and
bathorhodopsin pigments whose retinal chromophores have been labeled with
13C and 2H. Isotopic derivatives will also be used to assign the
vibrations of the 11-cis, 9-cis and all-trans retinal Schiff base model
compounds. Comparison of these frequencies and assignments will allow us
to determine the "opsin shift" of the C-C and C=C modes. These empirical
opsin shifts should allow us to pinpoint the location(s) of the opsin
perturbations responsible for Lambda max-regulation and energy storage. 2)
Vibrational force field calculations will be performed and protein-induced
changes in the force constants, normal modes, and Raman intensities will be
analyzed to provide more quantitative information on the nature of these
protein perturbations. 3) Magic angle sample spinning 13C-NMR spectra will
be obtained of rhodopsin and isorhodopsin regenerated with specific
13C-labeled retinals. The chemical shifts, relaxation times, and tensor
elements will be used as an additional probe of chromophore structure and
chromophore-protein interactions. 4) Models for chromophore structure and
protein-chromophore interactions in rhodopsin and bathorhodopsin will be
developed and evaluated with QCFF-Pi calculations. 5) Resonance Raman
microscopy will be used to study the mechanism(s) of Lambda max-regulation
in a variety of rod and cone photoreceptors to test the generality of the
ideas developed in (1)-(4). 6) In a related project, resonance Raman
spectra of retinoid binding proteins will be examined to determine the
structure of the bound retinal chromophore. This work will tell us how
these proteins solubilize retinoids for transport to and from the retinal
rod cell, and should provide additional information on how
protein-chromophore interactions produce opsin shifts.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
AnuraCyprinidaeRaman spectrometrySchiff basesbioenergeticschromophorecis trans isomerizationconformationfresh water environmentgoldfishnuclear magnetic resonance spectroscopyprotein structureretinaldehyderetinoid binding proteinsrhodopsinrod cellvisual photoreceptor
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