Awardee OrganizationSYRACUSE UNIVERSITY AT SYRACUSE
Description
Abstract Text
The long-term objectives of this research project are to assign
the structure of the chromophore binding sites in rhodopsin and
light-adapted bacteriorhodopsin and to define the molecular
electron details of the primary photochemical events in these two
protein systems. Three objectives will be carried out in order to
accomplish these goals: (1) Two-photon spectroscopy will be used
to identify the location and photophysical properties of the low-
lying "forbidden" pi-pi* states in various visual chromophore
analogs in solution and in the binding sites of the proteins. This
information, when combined with the one-photon spectroscopic data.
will provide insights into the nature and magnitude of the
electrostatic and dispersive perturbations induced by the protein
binding sites. (2) Energy storage in the primary events in
artificial rhodopsin and bacteriorhodopsin analogs will be measured
using pulsed laser photocalorimetry. By changing the position of
methyl groups along the polyene chain and determining the energy
storage associated with the photoisomerization it should be
possible to map out the geometry of the binding sites. (3) All-
valence electron (INDO-PSDCI) molecular orbital theory will be used
to help interpret the spectral data and calculate the ground and
excited state potential surfaces, and excited stat reaction paths,
for double bond isomerization for various models of the binding
sites. Semiclassical molecular dynamics theory will be used to
calculate the trajectories and the quantum yields of the primary
photochemical events. The effect of the protein will be included
in the above calculations using classical force field procedures
to determine the equilibrium geometry of the amino acid residues
on the alpha helices in the vicinity of the binding site. Various
models for the binding site can then be tested by comparing the
calculated results with the data obtained in the experimental
portions of this program as well as from the literature. The above
three studies will provide new insights into the molecular basis
of vertebrate visual transduction. In addition, studies on the
application of two-photon spectroscopy to determine the excited
state level ordering in free base and metalloporphyrins and the
nature of the binding sites of selected heme proteins will be
initiated.
No Sub Projects information available for 5R01GM034548-05
Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
No Publications available for 5R01GM034548-05
Patents
No Patents information available for 5R01GM034548-05
Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
No Outcomes available for 5R01GM034548-05
Clinical Studies
No Clinical Studies information available for 5R01GM034548-05
News and More
Related News Releases
No news release information available for 5R01GM034548-05
History
No Historical information available for 5R01GM034548-05
Similar Projects
No Similar Projects information available for 5R01GM034548-05