The goal of this proposal is to gain a deeper understanding of enzyme
catalysis. Our aims are:(a), to see why particular functional groups in
enzymes are ideal for particular catalytic tasks:(b), to recognize the
usefulness of particular structural motifs; (c), to be able to predict the
kinetic consequences of small structural changes; and (d), to see if the
kinetic properties of enzymes have been refined for each metabolic niche.
We shall continue to exploit triosephosphate isomerase, which is a splendid
test-bedford the evaluation of important elements of enzyme catalysis.
Site-directed changes will be use d to probe particular enzyme features and
functionalities, and the technique of random mutagenesis will be further
developed to explore the nature of the sequence 'landscape' in the
generation of catalytic potency. In these pursuits, answers to the
following questions will be sought: Do enzymes use bidentate bases and
acids to catalyze proton shifts merely by side-chain rotation? Can we test
recent theoretical statements about the importance of charges that are
relatively remote from the active site? How does an alpha-helix fine-tune
the pKa value of an ionizing group, or affect the strength of substrate
binding? What is the movement of 1 A worth kinetic terms? Can equivalent
rate accelerations be achieved wit a different set of catalytic groups? Are
enzymes from organisms adapted to lave a t-1.6oC or + 105oC predictably
different? Answers to these and other questions will provide a firmer basis
from which the catalytic activity of enzymes can become a predictive
science.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
X ray crystallographyacidity /alkalinitychemical bindingchemical groupchemical kineticsconformationenzyme mechanismenzyme structureenzyme substrateintermolecular interactionionizationmolecular geneticsmutantnuclear magnetic resonance spectroscopypoint mutationpolymerase chain reactionprotein engineeringprotein sequencesite directed mutagenesissuppressor mutationsthermodynamicsthermostabilitytriose phosphate isomerase
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