Awardee OrganizationUNIVERSITY OF WISCONSIN-MADISON
Description
Abstract Text
Many membrane proteins show altered activity when their lipid environment
is modified, and such changes may well be important in the regulation of
membrane protein function in vivo. The major focus of the proposed
research will be to determine the effects of specific aspects of the lipid
environment, particularly bilayer thickness, on both the structure and the
function of bacteriorhodopsin (BR), an integral membrane protein which
functions as a light-activated proton pump. In addition, lipid effects on
the structure of smaller fragments of BR will be investigated. By
examining the effects of lipid bilayer thickness, pH, and other ionic
conditions on the structure of these proteins and peptides, the relative
roles of hydrophobic and electrostatic forces in determining their
structures will be elucidated. In addition, structural studies on the
lipids themselves under the same conditions will permit the observation of
both sides of the protein-lipid interaction simultaneously. Finally, by
correlating the effects of environmental perturbations on the BR structure
with the effects on its function, a better understanding of the fundamental
mechanism of proton pumping will be gained.
The experimental approaches will involve mainly nuclear magnetic resonance
(NMR) and optical methods. The structural studies of BR and its fragments
will use a novel application of solid state NMR methods, which has recently
been developed and tested on BR, to obtain information on the orientation
of labeled groups in the protein as it executes rotational diffusion in
fluid membrane environments. Both 13C and 2H solid-state NMR studies will
be carried out on the protein, and 2H NMR studies will also be performed on
the lipids. Infared (IR) and circular dichroism (CD) spectroscopic studies
will complement the NMR structural data. The functional studies will
involve measurement of proton pumping activity and optical measurements of
both steady-state and kinetic spectral properties of BR; the latter will be
carried out in collaboration with the University of Virginia, using their
flash photolysis apparatus. Finally, x-ray scattering will be used to
measure the bilayer thickness for lipids not previously studied.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
HalobacteriaceaeX ray crystallographyacidity /alkalinitybacteriorhodopsinscircular dichroismflash photolysisinfrared radiationionslipid structuremembrane lipidsmembrane proteinsmembrane reconstitution /synthesisnuclear magnetic resonance spectroscopyprotein structure
No Sub Projects information available for 5R01GM038532-02
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