MUTATIONAL STUDY OF THE MECHANISM OF PROTEIN FOLDING
Project Number1R01GM042494-01
Contact PI/Project LeaderGOLDENBERG, DAVID P
Awardee OrganizationUNIVERSITY OF UTAH
Description
Abstract Text
The mechanism of folding of a small, well-characterized protein, bovine
pancreatic trypsin inhibitor (BPTI), will be studied by testing the
effects of amino acid substitutions on the stabilities of folding
intermediates and oh the stability and conformation of the native
protein. this project is directed towards the long-term goal of
understanding how the three-dimensional structures of globular proteins
are specified by their amino acid sequences and how changes in the amino
acid sequence may alter the properties of the native protein or the
process of forming it. Many diseases involving defects in protein
function may arise because of mutations that prevent proteins from
acquiring the correct three-dimensional structures required to interact
specifically with other molecules.
Modified forms of BPTI will be produced using in vitro mutagenesis and
recombinant DNA methods. A cloned gene coding for BPTI will be modified
using synthetic oligonucleotides and used to direct the synthesis of
mutant proteins in Escherichia coli. The disulfide-coupled folding
reactions of the mutant proteins will be studied by chemically trapping
and characterizing disulfide-bonded intermediates in folding and
unfolding. To allow quantitative comparisons of he mutant and wild-type
proteins, the relative stabilities of the native , unfolded and
intermediate state will be measured, as well as their rates of
interconversion.
Some of the mutations to be studied ar site-directed changes designed to
test the roles of specific residues and interactions in stabilizing the
native protein and determining the pathway of folding. These site-
directed changes are intended to disrupt interactions present in the
native protein, including hydrogen bonds, salt bridges and packing
interactions. Other mutants to be studied were identified amount
randomly mutagenized clones using a genetic screen to isolate mutants
with altered folding intermediate as well as in the native protein is
expected to alter the stability of both species similarly. From the
observed effects of the mutations on the relative stabilities of the
different species and their kinetics of interconversion, the roles of he
altered residues at the various stages of folding will be inferred.
No Sub Projects information available for 1R01GM042494-01
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