Analysis of bacterial systems has demonstrated that strand-specific DNA
mismatch correction protects the genome against mutation by removing
biosynthetic errors from newly replicated DNA and by aborting recombination
events between related, but non-allelic DNA sequences. We have recently
reconstituted E. coli methyl-directed mismatch repair in a pure system
comprised of 8 proteins, and have also demonstrated the existence of a
similar pathway in nuclear extracts derived from human cells. Like the
bacterial pathway, the system we have identified in human cells is able to
recognize and to process in a strand-specific manner the different classes
of base-base mispairs in a reaction that requires a replicative
(aphidicolin sensitive) DNA polymerase. The primary goal of this proposal
is to establish the molecular nature of strand-specific mismatch repair as
it occurs in human cells. To this end, the reaction occurring in HeLa
nuclear extracts will be characterized with respect to mismatch
specificity, size and location of excision repair tracts, involvement of
alpha and delta DNA polymerase, and possible involvement of the mammalian
homologue of MutS, the protein that mediates mismatch recognition in
bacterial systems. A major aim of this study is the isolation and
characterization of the components required for the human reaction, with
the hope that, as in the case of E. coli, we will be able to reconstruct
the reaction in a defined system. Since it is not possible to monitor the
course of a mismatch repair event occurring within a living cell, the
nuclear extract studies outlined above will provide the criteria for
evaluating successful reconstitution of the reaction in a purified system.
As an initial attempt to address the relationship between mismatch repair
proficiency and genetic stability in mammalian systems, we will also
participate in a collaborative study that will compare, with respect to
their proficiency in mismatch correction, a "wild type" CHO cell line and a
mutant derivative that contains a deletion spanning the gene encoding the
mammalian MutS homologue. Should a defect in mismatch repair be associated
with the mammalian MutS deletion, the spontaneous mutabilities of wild type
and mutant lines will be assessed.
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