GENETIC ANALYSIS OF YPTL A SMALL GTP-BINDING PROTEIN
Project Number5R01GM045444-02
Contact PI/Project LeaderSEGEV, NAVA
Awardee OrganizationUNIVERSITY OF CHICAGO
Description
Abstract Text
A central question in understanding cell growth concerns the mechanism by
which proteins are sorted into the correct compartments. It is believed
that protein transport between intracellular compartments is mediated by
membranous vesicles and that GTP-binding proteins are involved in the
regulation of the directionality and/or accuracy of this vesicular traffic.
Our long-term goals are to understand the mechanism of action of the GTP-
binding Ypt1 protein in secretion and to identify and study other
compartments of the vesicular transport machinery. We plan first to take
advantage of the sophisticated classical and molecular genetics of the
yeast system to isolate mutations in the Ypt1 gene and identify other genes
and gene products with which it interacts. The mutations in the Ypt1 gene
and selected genes with which it interacts will be then characterized by
cellular and biochemical approaches. The role of the mammalian Ypt1
protein, which shares 70% identify with the yeast protein, will also be
investigated by similar means.
This proposal is focussed on two specific aims: 1) definition of the
different domains of the Ypt1 protein and their function in protein
transport, and 2) identification and characterization of other components
of the vesicular transport machinery that interact with the Ypt1 protein.
The experimental approach will involve generation of mutations in the Ypt1
gene by random and site specific mutagenesis. Genetic, biochemical and
physiological analyses of mutations throughout the Ypt1 gene will used to
examine the structure-function relationship of the Ypt1 protein and its
various activities and interactions. For example, the role of the cycling
of Ypt1 protein between GTP and GDP-bound forms in secretion will be
examined. Specific functional regions will be determined by fine mapping
of ypt1 mutations and identification of sites that are involved in
interactions with other proteins. Genetic approaches will be used to
detect other genes whose products interact with, or participate in the same
pathway as the Ypt1 protein. Approaches similar to those used in the
analysis of Ypt1 will be applied to study these other components. Finally,
dominant mutations in the Ypt1 gene identified in yeast will be introduced
into mammalian cells to investigate their effect on protein transport and
growth of these cells.
In summary, these studies will help to elucidate the molecular basis of the
vesicular transport machinery and the role that GTP-binding proteins play
in its regulation. The ability to study both the yeast and the mammalian
systems provides a unique opportunity to approach these issues genetically
in both systems and to extend the principles learned with yeast to higher
cells.
No Sub Projects information available for 5R01GM045444-02
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