MOLECULAR ANALYSIS OF BASAL TRANSCRIPTION FACTOR SNAPC
Project Number1R01GM059805-01A2
Contact PI/Project LeaderHENRY, RONALD WILLIAM
Awardee OrganizationMICHIGAN STATE UNIVERSITY
Description
Abstract Text
DESCRIPTION (adapted from applicant's abstract): Transcriptional regulation
involves an interplay between regulatory proteins and the general
transcriptional machinery and is a key mechanism for control of many biological
processes. Coordination of gene expression is critical for healthy development,
differentiation, immune responses, and the maintenance of cellular homeostasis.
Disruptions in the program of transcriptional regulation are observed in many
diseased states such as cancer. Therefore, it is important to develop an
understanding of fundamental transcriptional mechanisms.
The long-term objective of this study is to understand how eukaryotic basal
transcription factors function in transcription and gene regulation. The model
system that the principal investigator uses is the transcription of human small
nuclear (sn) RNA genes. The snRNA gene family represents a large collection of
genes that have important functions in the cell. These genes have similar
promoter architectures and yet RNA polymerase II transcribes some of these
genes while RNA polymerase III transcribes others. Thus, these genes offer a
powerful system to analyze the molecular mechanisms of transcription for both
RNA polymerase II and III. Transcription of human snRNA genes, regardless of
polymerase specificity, requires the basal transcription factor referred to as
snRNA activating protein complex (SNAPc). This multi-protein complex binds
specifically to the core-promoter regions of human snRNA genes. SNAPc is
composed of at least five proteins SNAP 19, SNAP43, SNAP45, SNAP5O, and SNAP
190. In addition, the TATA-box binding protein (TBP) co-purifies with SNAPc.
Each of these proteins is required for snRNA transcription by both RNA
polymerases II and III. These proteins also contribute to the regulated
transcription of human snRNA genes. Human U6 gene transcription by RNA
polymerase III is repressed by the retinoblastoma tumor suppressor protein (Rb)
and this may involve communication between Rb and SNAPc. The principal
investigator has chosen to study SNAPc because this complex plays a key role in
human snRNA gene transcription by both RNA polymerases II and III and is a
direct target of regulatory proteins such as Rb. This project will employ
molecular techniques to understand the function of individual members of SNAPc
for regulated transcription by RNA polymerases II and III.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
DNA binding proteinDNA directed RNA polymerasebinding proteinseukaryotegene expressiongenetic mappinggenetic regulationgenetic transcriptionhuman genetic material tagimmunoprecipitationlaboratory rabbitmonoclonal antibodyphosphorylationprotein protein interactionretinoblastomasmall nuclear RNAtranscription factor
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