Partial Protein Unfolding as a Novel Signaling Mechanism
Project Number5R01GM063805-03
Contact PI/Project LeaderHOFF, WOUTER D
Awardee OrganizationUNIVERSITY OF CHICAGO
Description
Abstract Text
Receptor activation is at the basis of all biological signal transduction events. Malfunctioning of signaling pathways can cause cancer. We study the mechanism of receptor activation using photoactive yellow protein (PYP), a PAS domain photoreceptor, as a powerful model system. PYP exhibits rhodopsin-like photochemistry based on its p-coumaric acid (pCA) chromophore, and has been investigated by X-ray crystallography. We have recently shown that the presence of a protein crystal lattice greatly reduces the structural changes that occur during the formation of the pB photocycle intermediate, the presumed signaling state of PYP. In addition, our preliminary results strongly indicate that the pB intermediate is partially unfolded. In this proposal we will examine the role of partial protein unfolding upon receptor activation as a novel signal transduction mechanism. (i) We will establish the extent of partial protein unfolding during pB formation by NMR spectroscopy, and by two novel methods: light-induced H/D exchange and light-induced differential scanning calorimetry. In addition, we will examine the hypothesis that the pB intermediate is a molten globule state by studying changes in ANS fluorescence, changes in CD spectrum, and changes in the radius of gyration upon pB formation. (ii) We will examine the effects of the presence of a crystal lattice on the kinetics and thermodynamics of the photocycle using both wt- PYP and the E46Q mutant in both P6 3 and P6 5 crystals by flash photolysis at a range of temperatures. (iii) We will test the hypothesis that the Glu46-pCA couple constitutes the built-in default for the light-triggered protein quake in PYP. These experiments will reveal changes in functional dynamics imposed by a crystal lattice, and will determine the role of transient partial protein unfolding as a novel signal transduction mechanism that is anticipated to play a role not only in PYP but also in other signal transduction systems.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
acidity /alkalinityactive sitesbacterial proteinsbiological signal transductioncalorimetrychemical kineticschromophorecircular dichroismconformationcrystallizationelectrospray ionization mass spectrometryflash photolysisinfrared spectrometryinterferometrynonvisual photoreceptornuclear magnetic resonance spectroscopyphase changephotoactivationprotein foldingprotein structure functionprotonationradiotracersite directed mutagenesissolventsstructural biologythermodynamics
No Sub Projects information available for 5R01GM063805-03
Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
No Publications available for 5R01GM063805-03
Patents
No Patents information available for 5R01GM063805-03
Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
No Outcomes available for 5R01GM063805-03
Clinical Studies
No Clinical Studies information available for 5R01GM063805-03
News and More
Related News Releases
No news release information available for 5R01GM063805-03
History
No Historical information available for 5R01GM063805-03
Similar Projects
No Similar Projects information available for 5R01GM063805-03