DESCRIPTION (provided by applicant)
Structural studies will be conducted on oligodeoxynucleotides site-specifically
modified with specific adducts of the vinyl chloride metabolites
chlorooxirane and chloroacetaldehyde, and the alpha, beta-unsaturated
aldehydes acrolein, crotonaldehyde, and hydroxynonenal. The adduction sites
will be the N1, N2, and N3 positions of guanine, the N1 and N6 positions of
adenine, and the N3 and N4 positions of cytosine. The goal is to correlate
differences in chemistry between different classes of cyclic adducts, and
intra- and inter-strand crosslinks, with structural and conformational
properties in DNA. In turn, the structural information derived in this
project will be correlated with biological data from the second Project. Vinyl
chloride metabolites add a C2 unit, whereas acrolein, crotonaldehyde, and
hydroxynonerial add a C3 unit to the DNA base. One class of cyclic adducts to
be examined are termed "distal" adducts. In these, a hydroxy group in the
hydroxy ethano or hydroxy propano exocyclic adduct is positioned adjacent to
an amino nitrogen. These are postulated to be highly disruptive to DNA
structure because they interfere with Watson-Crick base pairing. Studies will
be geared towards understanding how the DNA duplex accommodates these
distortions. Another class of cyclic adducts to be examined are termed
"proximal" adducts, in which a hydroxy group of the cyclic hydroxy ethano or
hydroxy propano adduct is positioned adjacent to an imino nitrogen. For these
it is anticipated that the ring-opened form in which the monodentate adduct is
attached at the amino nitrogen will be stabilized in duplex DNA. Effort will
focus on understanding how duplex DNA modulates the position of this
equilibrium, and how the aldehyde that is the product of ring-opening is
accommodated by the DNA duplex. This is important because the aldehyde, once
formed, has the potential to crosslink the DNA. The structures of site-specific
DNA crosslinks identified in the second Project will be examined, as will the
role of DNA sequence in controlling crosslinking. The role of linker length
(C2 versus C3) on the ability to crosslink and the resulting distortions
introduced into duplex DNA by the crosslinks will also be examined.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
DNADNA damageadductchemical carcinogenconformationcrosslinkheterocyclic polycyclic compoundnuclear magnetic resonance spectroscopynucleic acid structureoligonucleotides
National Institute of Environmental Health Sciences
CFDA Code
DUNS Number
965717143
UEI
GTNBNWXJ12D5
004413456
DWH7MSXKA2A8
Project Start Date
01-August-2002
Project End Date
31-July-2003
Budget Start Date
Budget End Date
Project Funding Information for 2002
Total Funding
$107,756
Direct Costs
$107,756
Indirect Costs
Year
Funding IC
FY Total Cost by IC
2002
National Institute of Environmental Health Sciences
$107,756
Year
Funding IC
FY Total Cost by IC
Sub Projects
No Sub Projects information available for 5P01ES005355-12 0003
Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
No Publications available for 5P01ES005355-12 0003
Patents
No Patents information available for 5P01ES005355-12 0003
Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
No Outcomes available for 5P01ES005355-12 0003
Clinical Studies
No Clinical Studies information available for 5P01ES005355-12 0003
News and More
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History
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Similar Projects
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