DESCRIPTION (applicant's abstract): The tRNA synthetases are most prominently
known for their aminoacylation of tRNA during protein synthesis. However, these
enzymes play a number of diverse roles that are also essential to cells. One of
these examples is tRNA synthetase-dependent RNA splicing. A novel ternary
splicing complex has been identified in yeast where a group I intron called b14
is aided by two proteins, a maturase and a leucyl (Leu)-tRNA synthetase.
Tyr-tRNA synthetase (CYT- 18) is the only other tRNA synthetase that has been
found to facilitate RNA splicing. However, our preliminary data suggests that
the molecular mechanisms by which these two related enzymes promote ribozyme
self-splicing activity are quite distinct. Moreover, the Leu-tRNA
synthetase-dependent ribozyme is the first example of a two protein: one RNA
splicing complex and presents an intriguing elementary model to not only
investigate RNA-protein interactions, but also potentially protein-protein
interactions which might aid a ribozyme self-splicing reaction. We propose to
investigate the Leu-tRNA synthetase-dependent ribozyme splicing reaction and
identify discrete determinants that confer this protein synthesis enzyme's
unique role in RNA splicing. We have established three-hybrid and RNA-dependent
two-hybrid models that show for the first time that the Leu-tRNA synthetase and
bI4 maturase can directly, independently, and simultaneously interact with the
b14 intron. We have also developed a yeast nucleus-based assay via RT-PCR
methods demonstrating that at least one of these protein partners must be bound
to faciliate ribozyme splicing activity. We propose to map and identify
specific interactions between Leu-tRNA synthetase and the b14 intron that
dictate complex assembly and RNA splicing activity. Completion of the proposed
specific aims will delineate the undefined splicing role of Leu-tRNA synthetase
at the molecular level and provide insight into its inherent determinants that
solicited cellular recruitment of this secondary, but also essential activity.
Characterization of this simple ternary model offers an important stepping
stone in understanding how catalytic ribozymes evolved to more complicated RNP
complexes to enhance function and maintain essential biological processes.
Moreover, since protein-dependent RNA splicing is critical to the health of
human cells as well as to the life cycles of viral, protozoa, and fungal
pathogens, elucidation of important molecular determinants required for RNA
processing may identify new drug targets for the treatment of infectious
disease.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
RNARNA directed DNA polymeraseRNA splicingSaccharomyces cerevisiaeaffinity chromatographyaminoacid tRNA ligasebinding sitescatalystenzyme modelfungal geneticsfungal proteinsimmunoprecipitationintermolecular interactionintronsmitochondriamodel design /developmentmolecular assembly /self assemblyprotein structure functionsite directed mutagenesisspliceosomesyeast two hybrid system
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