Awardee OrganizationUNIVERSITY OF CALIFORNIA LOS ANGELES
Description
Abstract Text
DESCRIPTION (provided by the applicant): Our research is aimed at understanding gene expression in the family Trypanosomatidae, which includes the parasitic protozoon's responsible for leishmaniasis, African Sleeping Sickness, and Chagas Disease. The focus is on the genesis and function of the spliced leader (SL) RNA, a small RNA that contributes the 5'-end sequence to every nuclear messenger RNA via a trans-splicing reaction. Trans-splicing, which is necessary for the conversion of polycistronic pre-messenger RNA (a likely consequence of the unusual genome organization found in kinetoplastids) into monocistronic mRNA, is not found in the human host or insect vector and thus represents a possible therapeutic target. This proposal outlines three complementary sets of experiments that detail the maturation pathway of the SL RNA common to Leishmania tarentolae and Trypanosoma brucei. 1) To refine the map of cis elements (SL RNA sequences and structures) necessary for accurate and efficient maturation and trans-splicing. Data obtained will allow the future identification of trans factors (protein and RNA) that interact with essential regions of RNA. 2) To isolate and examine the role of an XPO1-dependent nuclear export complex in SL RNA trafficking. 3) Experimental examination of the roles of a 3'-exonuclease and two ribose 2'-O- methyltransferases in the maturation of the 3' and 5' ends of the SL RNA, and bioinformatic identification and modeling of these proteins' interaction with the SL RNA. These three goals address discrete steps in the maturation of the SL RNA that determine its subsequent function. Specific inhibition of the trans-splicing pathway is lethal to the cell and thus a prime target for anti-parasite intervention.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
LeishmaniaRNASDS polyacrylamide gel electrophoresisTrypanosoma bruceiTrypanosomatinabacterial proteinsbioinformaticsenzyme activityfluorescent in situ hybridizationgene expressionhost organism interactionlaboratory rabbitmethyltransferaseparasite infection mechanismpolymerase chain reactionprotein protein interactionprotozoaspleen exonuclease
National Institute of Allergy and Infectious Diseases
CFDA Code
855
DUNS Number
092530369
UEI
RN64EPNH8JC6
Project Start Date
01-April-2004
Project End Date
31-March-2009
Budget Start Date
01-April-2006
Budget End Date
31-March-2007
Project Funding Information for 2006
Total Funding
$363,945
Direct Costs
$244,125
Indirect Costs
$119,820
Year
Funding IC
FY Total Cost by IC
2006
National Institute of Allergy and Infectious Diseases
$363,945
Year
Funding IC
FY Total Cost by IC
Sub Projects
No Sub Projects information available for 5R01AI056034-03
Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
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Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
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Clinical Studies
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