Awardee OrganizationBOSTON UNIVERSITY MEDICAL CAMPUS
Description
Abstract Text
This subproject is one of many research subprojects utilizing the resources
provided by a Center grant funded by NIH/NCRR. Primary support for the subproject
and the subproject's principal investigator may have been provided by other sources,
including other NIH sources. The Total Cost listed for the subproject likely
represents the estimated amount of Center infrastructure utilized by the subproject,
not direct funding provided by the NCRR grant to the subproject or subproject staff.
Glycosaminoglycans (GAGs) are linear sulfated oligosaccharides found attached to core proteins on cell surfaces, in basement membranes and extracellular matrices. These molecules are central to patterning events during animal development and function to bind many families of growth factors and growth factor receptors. Because they are sulfated, glycosaminoglycans pose unique analytical challenges. Tandem mass spectrometry of chondroitin sulfate and heparan sulfate oligosaccharides was pioneered at the BUSM Mass Spectrometry Resource, and staff act to disseminate knowledge to the scientific community. Communication through scientific talks and laboratory demonstrations are forms of dissemination and training whereby transfer of information on GAG MS takes place.
The following summarize dissemination and training during 2010-11:
Review articles:
Zaia, J. "Mass spectrometry and glycomics" OMICS 2010, 14, 401-18.
Zaia, J. "At last, functional glycomics" Nat Methods 2011, 8, 55-7.
Undergraduate student mentoring:
-Matthew Walsh, undergraduate student from Swarthmore College, summer 2010
-Shannon Conley, undergraduate-LEAP engineering student from Boston University, summer and fall 2010
Graduate student mentoring:
-Hicham Naimy, Ph.D. student, BUSM, Dept. of Biochemistry, defended thesis 4/1/11
-Yu Huang, 3rd year Ph.D. student, BUSM, Dept. of Biochemistry
-Han Hu, Ph.D. student, Bioinformatics Program, joined the group in August, 2010.
-Three first year biochemistry graduate student rotation students: Chun Shiao, Lynes Torres, and Samantha Hiemer.
Academic lectures:
April 21, 2010 Department of Chemistry, Boston University, Bioinformatics Program
Glycomics: overview of the state-of-the-art
May 26, 2010 American Society for Mass Spectrometry, Workshop on Glycoproteomics,
Salt Lake City, Utah
Label free quantification of glycans from LC/MS data
May 27, 2010 University of Utah, Department of Medicinal Chemistry, seminar speaker
Heparan sulfate structural phenotypes
June 19, 2010 HPLC 2010, Boston, MA, short course on glycoproteomics, gave three one hour lectures.
July 10, 2010 Glycobiology and Glycomics of Glycosaminoglycans Symposium 2010, Rensellear Polytechnic Institute, Troy, NY
Heparan sulfate structural phenotypes
Aug. 24, 2010 Charles Warren Workshop on Glycomics, Gothenburg, Sweden
Glycomics of glycosaminoglycans: update on LC/MS, tandem MS and informatics
Nov. 5-6, 2010 Invited lecturer, American Society for Mass Spectrometry 2010 fall workshop on glycoproteomics and glycomics, two one hour lectures
Introduction to glycol-analysis
Mass spectrometry of glycosaminoglycans
Feb. 21, 2011 Invited lecture: Glycoprotein Research Group session at the Association for Biomolecular Resource Facilities annual meeting, San Antonio Texas.
"Prospectus for 2012 gPRG study on glycoprotein analysis"
March 8, 2011 Merrimack Pharpacuuticals, Cambridge, MA, SAB meeting
"Heparan sulfate structural and functional analysis"
Scientific meeting abstracts:
58th ASMS Conference on Mass Spectrometry and Allied Topics, May 23-27, 2010, Salt Lake City, UT
Title: Characterization of heparan sulfate N-sulfated domains binding fibroblast growth factor-2.
Hicham Naimy, Nancy Leymarie, Joseph Zaia
Title: Toward More Structurally Informative Tandem MS of Heparan Sulfate: Chemical Modifications to Reduce Sulfate Density
Xiaofeng Shi, Huang Yu and Joseph Zaia
Title: Improvement of ESI Behavior of Heparan Sulfate Oligosaccharides by Using a Chip-based Pulsed Post-Column Makeup Flow for On-line LC/MS
Yu Huang, Hongfeng Yin, Kevin Kileen, Joseph Zaia
Title: LC/MS Analysis of Heparan Sulfate Chain Processing by Human Sulf2
Gregory O Staples ; Xiaofeng Shi ; Joseph Zaia
Proteoglycans Gordon Conference, July 11-15, 2010, Andover, NH
Title: Characterization of heparan sulfate N-sulfated domains binding fibroblast growth
factor-2.
Hicham Naimy, Nancy Leymarie, Joseph Zaia
Title: Heparan Sulfate Chain Processing by Human Sulf2
Gregory O Staples ; Xiaofeng Shi ; Joseph Zaia*
Charles Warren Workshop III, August 27-30, 2010 Hind¿s, Gothenburg, Sweden
Title: Glycomics of glycosaminoglycans: update on LC/MS, tandem MS and informatics
Society for Glycobiology 2010 annual conference, St. Petersburg, FL
Title: Characterization of heparan sulfate N-sulfated domains binding fibroblast growth factor-2.
Hicham Naimy, Nancy Leymarie, Joseph Zaia
Title: Improved Heparan Sulfate Oligosaccharide Structural Analysis by LC-Tandem Mass Spectrometry with Post-column Pulsing of Additives
Improved Heparan Sulfate Oligosaccharide Structural Analysis by LC-Tandem Mass Spectrometry with Post-column Pulsing of Additives
Public Health Relevance Statement
Data not available.
NIH Spending Category
Biotechnology
Project Terms
AllyAmericanAnimalsBasement membraneBehaviorBindingBiochemistryBioinformaticsBiologyBostonCell surfaceChemicalsChemistryChondroitin SulfatesCitiesCommunicationCommunitiesCore ProteinDataDevelopmentDoctor of PhilosophyEducational workshopEngineeringEventExtracellular MatrixFamilyFibroblast Growth Factor 2FundingGlycobiologyGlycolsGlycoproteinsGlycosaminoglycansGrantGrowth FactorGrowth Factor ReceptorsHeparitin SulfateHigh Pressure Liquid ChromatographyHourHumanInformaticsInorganic SulfatesInstitutesKnowledgeLabelLaboratoriesMass Spectrum AnalysisMedicineMentorsMethodsModificationNational Center for Research ResourcesOligosaccharidesPatternPharmaceutical ChemistryPhenotypePhysiologic pulsePolysaccharidesPrincipal InvestigatorProcessProteoglycanResearchResearch InfrastructureResourcesRotationSocietiesSodium ChlorideSourceStudentsSwedenTexasTrainingUnited States National Institutes of HealthUniversitiesUnspecified or Sulfate Ion SulfatesUpdateUtahYinbasecollegecostdensityfallsgraduate studentimprovedlecturerlecturesliquid chromatography mass spectrometrymeeting abstractsmeetingspolysulfated glycosaminoglycanprogramsprospectusessymposiumtandem mass spectrometry
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