Structural Dynamics of Retinal Binding and Release
Project Number5R01EY015436-07
Contact PI/Project LeaderFARRENS, DAVID L
Awardee OrganizationOREGON HEALTH & SCIENCE UNIVERSITY
Description
Abstract Text
PROJECT SUMMARY
The long-term goal of our research is to understand the molecular mechanisms through which G-protein
coupled receptors (GPCRs) are activated and attenuated. These receptors represent the largest family in the
human genome, and they are the target of most pharmaceutical drugs. We focus our studies primarily on the
GPCR rhodopsin and its affiliate proteins. Although crystal structures of key proteins involved in visual
signaling are now known, most of the critical structural changes these proteins undergo during their activation
and attenuation remain largely a matter of speculation.
In particular, we lack even rudimentary information about the dynamic events involved in attenuating rhodopsin
signaling, namely, the mechanisms through which retinal is released from the opsin-binding pocket, and how
retinal binding and release affects arrestin binding and release. Understanding these processes is of
fundamental importance for vision research - the stability of the retinal linkage varies widely among different
opsins and is a factor in some visual disease states. Furthermore, although much is known about the
mechanism and kinetics of arrestin binding to rhodopsin, little is known about what makes arrestin release after
binding, and how this release is related to the status of the retinal chromophore.
In Aim I of this proposal we will determine how rhodopsin controls the hydrolysis of its retinal Schiff base
linkage. In Aim II we will examine how retinal uptake and release occurs in rhodopsin, using the recent
structure of opsin to guide our studies. Finally, in Aim III, we will use our novel methods to follow up on a
discovery we made during the last funding period - that arrestin can bind to MIII rhodopsin, thus trapping and
preventing retinal release. Understanding how arrestin regulates retinal release is fundamentally important to
health, as arrestin may serve to limit the release of free retinal under bright light conditions, and thus help limit
the formation of oxidative retinal adducts that can contribute to diseases like atrophic age-related macular
degeneration (AMD). Similarly, understanding what makes arrestin "let go" after binding rhodopsin is also
crucial - stable rhodopsin-arrestin complexes have been suggested to be a contributing factor in apoptosis and
autosomal dominant retinitis pigmentosa (ADRP).
Public Health Relevance Statement
PROJECT NARRATIVE
The proposed research will define the molecular events involved in the binding and release of retinal. We will
investigate how retinal gets into and out of the binding pocket in rhodopsin, what makes it stay there (i.e., how
the Schiff-base linkage forms and hydrolyzes), and how the protein arrestin affects these processes.
Answering these fundamental questions will help shed light on more general questions in vision, such as why
rates of retinal binding and release vary so greatly between Rod and Cone rhodopsins, and help elucidate
underlying mechanisms for several retinal diseases.
Eye Disease and Disorders of Vision; Neurosciences
Sub Projects
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