ATP-Dependent Chromatin Remodeling and Genomic Instability in Mammalian Cells
Project Number5R01CA127945-06
Contact PI/Project LeaderLI, LEI
Awardee OrganizationUNIVERSITY OF TX MD ANDERSON CAN CTR
Description
Abstract Text
ABSTRACT
The Ino80 chromatin remodeling complex plays an important role in the repair of
radiation-induced DNA double strand breaks in lower eukaryotes. This discovery
provides the first strong evidence that accessibility to DNA in the context of highly
compact chromatin structure is a critical factor in DNA damage response. It becomes
increasingly clear that maintenance of genome stability depends on highly coordinated
actions of DNA damage repair, cell cycle checkpoint, and chromatin remodeling
mechanisms. While the first two mechanisms have been the subject of extensive
investigations during the past decades, the role of chromatin modification and
remodeling in DNA damage response remains largely unclear, particularly in mammalian
systems. Our proposed studies are aimed at delineating how chromatin remodeling
activities support removal of DNA lesions and initiation of damage-induced cell cycle
checkpoint signals. Our focus will be on two key subunits of the Ino80 ATP-dependent
chromatin remodeling complex, Ino80 and Arp5. Ino80 is a unique member of the SNF2
superfamily that is believed to be a specialized chromatin remodeler assisting in DNA
repair. Arp5 is an actin-related nuclear protein and an integral subunit of the Ino80
complex. Mutations of either gene in budding yeast render cells hypersensitive to a
broad spectrum of genotoxic agents. In this application, we seek to understand how
Ino80 modulates DNA damage responses. We have successfully created, via
homologous targeting, loss-of-function human cellular models for INO80 and ARP5.
These genetic model systems will serve as unique tools to study the function of Ino80
and Arp5 in cell proliferation, repair of ionizing radiation and UV-induced DNA lesions,
damage-induced cell cycle arrest, and apoptosis. Our results are expected to further
elucidate the mechanisms of the DNA damage response system and the molecular
basis of genomic instability at large. Our results should also be useful for identification of
novel therapeutic targets, especially targets for radiation sensitization. NARRATIVE
Access to DNA lesions is a key prerequisite for many cellular mechanisms that act to
protect the integrity of the human genome. Studies proposed in this application seek to
understand the role of chromatin remodeling complex in creating such access by using
molecular and genetics approaches. Results from the proposed work have the potential
to unveil novel mechanism of genetic instability and to identify novel targets for cancer
therapy.
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