Machine vision guided robotics for automated microinjections into fruit fly embryos
Project Number1R43OD037625-01A1
Former Number1R43OD037625-01A1
Contact PI/Project LeaderALEGRIA, ANDREW D
Awardee OrganizationOBJECTIVE BIOTECHNOLOGY, INC.
Description
Abstract Text
PROJECT SUMMARY
Objective Biotechnology is a spin-out from the University of Minnesota that is pioneering the use of machine
vision guided robots for automating precise microbiology procedures such as microinjection. Drosophila
melanogaster (fruit fly) is a model organism extensively used in both basic and clinical research. A key challenge
in Drosophila biological research is the bottleneck of generating and maintaining transgenic lines of flies.
Traditionally, transgenesis involves skilled technicians performing intricate and precise microinjection
procedures repeatedly. However, Objective Biotechnology Inc. has introduced an innovative solution - a
machine vision guided robot designed to automate the microinjection process for Drosophila
melanogaster embryos. This technology can also be adapted for use with various other organisms. This robot
eliminates the need for manual microinjection protocols, which are operator-dependent, time-consuming, and
require significant training. The robot uses machine learning (ML) models trained to detect individual embryos
on agar plates and guides microinjection needles to perform microinjections at specific locations in each detected
embryo. This robot can be operated by individuals with no prior experience and surpass human capabilities
in terms of microinjection speed, performing at a rate six times faster than humans.
In AIM 1 of this proposal, we will evaluate the efficacy and generalizability of the Autoinjector technology for
transgenesis across a wide spectrum of Drosophila experiments. This involves testing and refining the
automated microinjection process for different genetic backgrounds, microinjection locations, microinjectant
compositions, construct sizes, auxiliary plasmids or transgenes, as well as various operational variables such as
embryo laying conditions, culture media, DNA concentration, and solution viscosity.
AIM 2 of this proposal we will innovate the ML algorithms to address two identified failure modes in the automated
microinjection process. These failure modes are (1) the inability to detect individual embryos when they are
clustered together on the embryo collection plates and (2) the clogging of pipettes during automated
microinjection. We will develop ML-guided robotic algorithms to mitigate these issues and improve the overall
performance of the system.
Public Health Relevance Statement
PROJECT NARRATIVE
In this proposal, Objective Biotechnology seeks to develop a commercial-grade automated microinjection
system, building on an extensively validated system developed by the company’s founders at the University of
Minnesota via an R21 grant. This technology will support microinjection investigations for transgenesis,
mutagenesis, cell labeling, small molecule screening, cryopreservation, and in vitro fertilization across many
different organisms. Our automated microinjection system will make these techniques more accessible, reduce
costs, and dramatically increase the scale at which such experiments can be carried out, broadly accelerating
discovery related to human health and disease in animal research models, and thus this proposal is relevant to
most NIH Institutes.
NIH Spending Category
No NIH Spending Category available.
Project Terms
AccelerationAddressAffectAgarAlgorithmsAnimal ExperimentationApplications GrantsBasic ScienceBiologyBiomedical ResearchBiotechnologyCRISPR/Cas technologyCaenorhabditis elegansCellsClinical ResearchCollectionCommercial gradeComputer Vision SystemsConsumptionCryopreservationCulture MediaDNADataDetectionDevicesDiseaseDouble-Stranded RNADrosophila genusDrosophila melanogasterDyesEmbryoEnvironmentEvaluationFailureFarmFeedbackFertilization in VitroGene Transfer TechniquesGeneticGenomicsGoalsGrantHealthHourHumanIndividualInjectionsInterventionInvestigationLabelLaboratoriesLaboratory ResearchLegal patentLocationMachine LearningManualsMediatingMicrobiologyMicroinjectionsMicroscopicMinnesotaModelingMonitorMusMutagenesisMutationNeedlesNeurosciencesOrganismOutcomePerformancePhasePlasmidsProceduresProcessProtocols documentationResearchResourcesRobotRoboticsSiteSmall Business Innovation Research GrantSpeedSystemTechniquesTechnologyTestingTimeTrainingTransgenesTransgenic OrganismsTransplantationUnited States National Institutes of HealthUniversitiesViscosityZebrafishbiological researchcommercializationcostdesignefficacy evaluationeggexperienceexperimental studyflyimprovedinnovationinstrumentationmachine learning algorithmmachine learning modelmachine visionmodel organismmultidisciplinaryoperationprototypescreeningskillssmall moleculesuccesstool
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