High accuracy automated tick classification using computer vision
Project Number5R44AI162425-03
Former Number3R43AI162425-01A1S1
Contact PI/Project LeaderGOODWIN, AUTUMN
Awardee OrganizationVECTECH, LLC
Description
Abstract Text
Abstract. The incidence of US tick-borne diseases has more than doubled in the last two decades. Today,
Lyme disease is the most common vector-borne disease in the United States, impacting over
half-a-million Americans each year. Due to lack of effective vaccines for tick-borne diseases, prevention
of tick bites and early tick bite treatment is the primary focus of disease mitigation. Tick vector
surveillance—monitoring an area to understand tick species composition, abundance, and spatial
distribution—is key to providing the public with accurate and up-to-date information when they are in
areas of high risk, and enabling precision vector control when necessary. Despite the importance of vector
surveillance, current practices are highly resource intensive and require significant labor and time to
collect and identify vector specimens. Acarologist or field taxonomist expertise is a limited resource
required for tick identification, creating a significant capability barrier for national tick surveillance
practice. While mobile applications to facilitate passive surveillance and reporting of human-tick
encounters have grown in popularity, variable image quality, limited engagement, and scientist
misidentification of rare, invasive, or morphologically similar tick species hinder the scalability of this
approach. To date, no automated solutions exist to build tick identification capacity. We seek to advance
Phase I work that successfully achieved an imaging and automated identification system capable of
instantaneously and accurately identifying twelve adult tick species with 98% accuracy. This proposal
will first improve the Phase I optical design for scalability to accommodate imaging of additional
intra-specific tick species variability as nymphs, adult males, and unfed or engorged adult females. In
parallel, we develop methods to optimize quality of guided user imaging of ticks in a mobile app
approach for the general public. This will enable the development of a representative image database with
partners including TickSpotters, TickCheck, the WalterReed Biosystems Unit (WRBU), and others. The
resulting database will be used to train, validate, test and deploy high-accuracy computer vision models in
two tick identification products for professional public health and the general public. Ultimately the
approaches developed here will enable vector management organizations to leverage image recognition in
a practical system that will increase capacity and capability for biosurveillance, and equip the general
public with improved tools to identify ticks during a human-tick encounter.
Public Health Relevance Statement
Project Narrative. Current tick identification methods are highly resource and labor intensive, requiring
physical collection of specimens and subsequent identification of species, sex, life stage, and
engorgement by an acarologist based on visual morphological inspection. Here we propose to advance a
prototype deep learning system capable of instantaneously and accurately identifying twelve
medically-relevant adult tick species with 98% accuracy for practical deployment in professional public
health and the general public. The resulting products developed through this proposal will ultimately
expand tick surveillance capability and capacity, and strengthen public health response to tick-borne
diseases.
National Institute of Allergy and Infectious Diseases
CFDA Code
855
DUNS Number
117161343
UEI
KGHKP3FBMB97
Project Start Date
18-April-2022
Project End Date
30-April-2026
Budget Start Date
01-May-2024
Budget End Date
30-April-2025
Project Funding Information for 2024
Total Funding
$942,842
Direct Costs
$660,173
Indirect Costs
$220,988
Year
Funding IC
FY Total Cost by IC
2024
National Institute of Allergy and Infectious Diseases
$942,842
Year
Funding IC
FY Total Cost by IC
Sub Projects
No Sub Projects information available for 5R44AI162425-03
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