Project Summary/Abstract Bioinformatics Core Component
The Idaho INBRE-4 Bioinformatics Core will integrate cyberinfrastructure tools and resources,
bioinformatics/biostatistical consulting, and bioinformatics training. The Core will support computationally-
intensive research under the broad Cell Signaling scientific theme. Facilities are physically located at the UI,
ISU, and BSU and open to the INBRE Network. At the UI, IBEST includes a Computational Resources Core, a
Genomics Resources Core, and an Optical Imaging Core. At ISU, the Molecular Research Core Facility
includes DNA and RNA sequencing, advanced imaging, and flow cytometry. At BSU, the Biomolecular
Research Center includes proteomics and metabolomics, protein-protein molecular interactions, and imaging.
KA Cornell is the current Bioinformatics Core Director (INBRE-3) and will continue in this role during INBRE-4.
He is well qualified with strong administrative experience and an active research program that has been funded
by NIH, NSF, USDA, and DOD. A Bioinformatics Committee with representatives from all INBRE partner
institutions will guide Core use and educational resources. Members have expertise in bioinformatics,
bioinformatics education, or experience in Core facility operations. Previous progress was significant, and
highlights include (i) INBRE-initiated Cores are now university sustained, (ii) increased Core users to >1,700,
(iii) integrated bioinformatics in science curricula at all INBRE institutions (35 courses), (iv) MS/PhD programs
in Bioinformatics and Computational Biology at the UI, and (v) a new BA/BS degree in Bioinformatics at Lewis-
Clark State College (a PUI). This new BA/BS major was INBRE-supported through faculty/student research,
new faculty hires, new equipment purchases, and Network collaborations with research-intensive universities.
Plans to familiarize researchers and students with bioinformatics tools and resources include competitive
Technology Access Grants (TAGs) for scientifically meritorious projects and workshops/seminars in the INBRE
Student Program. Bioinformatics will continue to be integrated into curricula and research. INBRE institutions
will continue to use local and remote bioinformatics servers for hands-on undergraduate/graduate student
education. The Core will partner with the Northwest Knowledge Network for high bandwidth networking and
secure data storage. A dedicated section of the Idaho INBRE website, the Bioinformatics Educational
Repository, organizes lectures, laboratory exercises, assessment tools, and supplementary materials for
faculty and student use. An innovation of the Bioinformatics Core is to share established programs and
infrastructure through a tri-state Regional Alliance of INBRE Networks (RAIN) with Montana and New Mexico
INBREs. This collaboration will reduce redundancy, increase interdisciplinary Core use and research
collaborations among faculty, and broaden bioinformatics research and education opportunities for students.
Pooled resources include (i) bioinformatics degree programs in Idaho, (ii) biostatistics and metabolomics in the
Montana INBRE, and (iii) leading-edge sequencing and bioinformatics training by the New Mexico INBRE.
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
AddressAreaAssessment toolBindingBioinformaticsBiomedical ResearchBiometryCenters of Research ExcellenceCollaborationsComputational BiologyCore FacilityDNA sequencingDataData Storage and RetrievalDedicationsDegree programDevelopmentDoctor of PhilosophyEducationEducational CurriculumEducational process of instructingEducational workshopEnvironmentFacultyFlow CytometryFundingGrantIdahoImageImage CytometryInfrastructureInstitutionInterdisciplinary StudyKnowledgeLaboratoriesLearningLife Cycle StagesLocationMentorsMolecularMontanaNew MexicoPilot ProjectsPositioning AttributeProteinsProteomicsQualifyingResearchResearch PersonnelResearch Project GrantsResourcesRoleRunningScienceSecureServicesSignal TransductionSiteSpecialized CenterStreamStudentsTechnologyTimeTrainingTraining and EducationUnited States Department of AgricultureUnited States National Institutes of HealthUniversitiesbioinformatics resourcebioinformatics toolcareer developmentcollegecommunity collegecomputing resourcescyber infrastructuredata managementeducation resourcesequipment acquisitionexperiencefaculty mentorgenome resourcegraduate studentimprovedinnovationlaboratory experimentlecturesmembermetabolomicsonline resourceoperationoptical imagingprogramsrepositoryskillsstudent trainingtooltranscriptome sequencingundergraduate research experienceundergraduate studentweb site
No Sub Projects information available for 3P20GM103408-23S5 7175
Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
No Publications available for 3P20GM103408-23S5 7175
Patents
No Patents information available for 3P20GM103408-23S5 7175
Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
No Outcomes available for 3P20GM103408-23S5 7175
Clinical Studies
No Clinical Studies information available for 3P20GM103408-23S5 7175
News and More
Related News Releases
No news release information available for 3P20GM103408-23S5 7175
History
No Historical information available for 3P20GM103408-23S5 7175
Similar Projects
No Similar Projects information available for 3P20GM103408-23S5 7175