Ultrasensitive Env Detection Assay for Broadly Neutralizing Antibody Screening
Project Number5R61AI176582-02
Contact PI/Project LeaderLYNCH, REBECCA MARIE Other PIs
Awardee OrganizationGEORGE WASHINGTON UNIVERSITY
Description
Abstract Text
PROJECT SUMMARY
Broadly neutralizing antibodies (bNAbs) are a promising immunotherapy that can be incorporated in many
strategies for the treatment and/or cure of HIV-1. There is a clear association between the neutralization
sensitivity of virus and how effective bNAbs are in suppressing virus replication during clinical trials, but the
precise nature of this relationship is still not clear. Individual clinical trials have reached different conclusions
about the utility of pre-screening participants’ virus for in vitro neutralization sensitivity before enrollment into
clinical trials mainly due to two obstacles: length of assay time and difficulty in obtaining the correct samples to
test. The Bosque lab has recently published an ultrasensitive method to detect p24 gag protein down to the fg/ml
level, and the assay was validated in ex vivo cells from PLWH. Here we will apply this novel methodology to
address these 2 obstacles by developing an assay that gives an indirect readout of neutralization sensitivity but
in a very short amount of time and directly in cell lysates. We will achieve this ultra-sensitive Env binding assay
by developing it in three parts for the first R61 phase: Aim 1 will optimize the capture and detector antibodies by
testing a matrix of bNAbs against diverse pseudoviruses with known neutralization sensitivities, Aim 2 will
optimize biological matrices by testing Env detection in plasma and cell lysates, and Aim 3 will determine assay
precision for ratios of sensitive and resistant virus in a diverse viral quasispecies. We will validate and qualify
this ultra-sensitive Env binding assay during the second R33 phase in two parts: Aim 4 will validate the assay
through post-hoc testing of well-studied clinical trial samples. Aim 5 will implement correct quality systems for
this assay to prepare for CLIA qualification. Our multi-disciplinary team has all the expertise necessary to achieve
these aims that, when completed, result in an ultra-sensitive binding assay for Env protein to screen clinical trial
participants that is time-efficient, accurate and qualified.
Public Health Relevance Statement
NARRATIVE
There is a clear association between the neutralization sensitivity of virus and how effective bNAbs are in
suppressing virus replication during clinical trials; however, there are two main obstacles that limit the use of this
assay: length of assay time and difficulty in obtaining the correct samples to test. We propose an ultra-sensitive
Env binding assay whose results will correlate to neutralization assay results but will take hours, and that can
directly measure translationally competent virus directly in cells lysates, increasing the sampling depth. Our multi-
disciplinary team has all the expertise necessary to achieve these aims that, when completed, result in an ultra-
sensitive binding assay for Env protein to screen clinical trial participants that is time efficient, accurate and
qualified.
National Institute of Allergy and Infectious Diseases
CFDA Code
855
DUNS Number
043990498
UEI
ECR5E2LU5BL6
Project Start Date
12-April-2023
Project End Date
31-March-2026
Budget Start Date
01-April-2024
Budget End Date
31-March-2025
Project Funding Information for 2024
Total Funding
$449,464
Direct Costs
$278,787
Indirect Costs
$170,677
Year
Funding IC
FY Total Cost by IC
2024
National Institute of Allergy and Infectious Diseases
$449,464
Year
Funding IC
FY Total Cost by IC
Sub Projects
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