Awardee OrganizationCOLUMBIA UNIVERSITY HEALTH SCIENCES
Description
Abstract Text
MOLECULAR PATHOLOGY SHARED RESOURCE: PROJECT SUMMARY
The Molecular Pathology Shared Resource (MPSR) facilitates tissue-based research by the acquisition,
processing and characterization of tissues, providing related data, material and diverse expertise that enables
discovery, characterization and validation. It does so through three integrated services: (1) tumor banking; (2)
histology and related services including immunohistochemistry (IHC) and immunofluorescence (IF), tissue micro-
array construction, image digitalization and analysis and tumor review by board certified pathologists; and (3)
consultation and project management services. Directed by Hanina Hibshoosh, MD, the MPSR is staffed by
dedicated/certified histotechnologists, immunohistochemistry experts, board-certified pathologists, a PhD-level
molecular biologist, physician assistant, and database experts. During the current project period (2014-2019),
the MPSR fulfilled 13,004 service requests from 107 HICCC members The MPSR allows for seamless integration
of services that span from tumor capture, tissue processing, hematoxylin and eosin
(H&E)/Immunohistochemistry (IHC) generation and expert review, microdissection, and DNA/RNA/protein
extraction in preparation for multi-omics characterization. MPSR banking services are comprehensive,
innovative, and unique allowing investigators to participate in trials/projects (e.g., Oncology Phase I program, N-
1 master regulator analysis, NCI Early Onset Malignancy program and NCI Patient Derived Models Tissue
Procurement Protocol) knowing they can effectuate their specific tissue based requirements by an efficient “plug
and play model” requiring only a single notification. MPSR’s Next Generation banking platform has enabled
research in breast (PTEN discovery and characterization), pancreas (enabled recruitment and research) and
participation in The Cancer Genome Atlas. MPSR’s extensive user base is cost-, quality-, and efficiency-sensitive
and has chosen the MPSR to provide services in the highly competitive histology market, which a clear indicator
of the facilities value. The MPSR’s scale is reflective of value add, the utility of tissue analysis, as well as the
quality and breadth of our services, their cost effectiveness, efficient delivery of services, material (tumors, DNA,
RNA, proteins), data, and expertise that the MPSR provides its users. Over the current project period, the
capabilities of the MPSR were utilized by 107 HICCC members, supported key data and insights facilitating 57
HICCC member peer-reviewed publications including 23 contributions in journals with impact factor >10 of which
12 were in journals with an impact factor of greater than 20 (Nature, Nature Medicine, Nature Genetics, Genome
Medicine ). and currently supports research for 82 NIH-funded grants (41 from NCI).
Public Health Relevance Statement
Data not available.
NIH Spending Category
No NIH Spending Category available.
Project Terms
AddressAutomationBoard CertificationBreastCancer Center Support GrantCancer DiagnosticsCellsCellular biologyCertificationClinicalClinical DataCollectionConsultationsDNADataDatabasesDedicationsDoctor of PhilosophyFormalinFreezingFresh TissueFundingGenerationsGeneticGenomeGoalsGrantHematoxylin and Eosin Staining MethodHistologyImage AnalysisImmunofluorescence ImmunologicImmunohistochemistryJournalsLinkLocationLymphomaMalignant NeoplasmsMarketingMedical centerMedicineMicrodissectionModelingMolecularNatureNotificationOncologyOperating RoomsOrganoidsPTEN genePancreasParaffin EmbeddingPathologistPathologyPatientsPeer ReviewPhasePhysician AssistantsPlayPreparationProteinsProtocols documentationPublicationsRNAResearchResearch PersonnelResearch SupportResectedResource SharingResourcesRetrievalScheduleServicesSlideSpecimenStainsThe Cancer Genome AtlasTimeTissue MicroarrayTissue ModelTissue ProcurementsTissuesTrainingTumor BankUnited States National Institutes of HealthUniversitiesValidationanti-cancer researchbasecostcost effectivenessdigitaldigital imagingearly onsetexperienceinnovationinsightmembermolecular pathologymultiple omicsnext generationoperationprofessorprogramsprospectiverecruitsample collectionservice deliverytissue processingtooltumor
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Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
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Patents
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Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
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Clinical Studies
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History
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