Hydrogel-Based Aged Immune Organoids to Study Epigenetics and Trajectory of B Cells
Project Number1R01AI181282-01A1
Former Number1R01AI181282-01
Contact PI/Project LeaderSINGH, ANKUR
Awardee OrganizationGEORGIA INSTITUTE OF TECHNOLOGY
Description
Abstract Text
PROJECT SUMMARY
Aged individuals, who are often at higher risk of fatality in life-threatening infectious diseases, do not form high-
quality antibodies against new infections. Humoral immunity against infections depends on the germinal center
(GC) differentiation process in the B cell follicles of lymph nodes. In GCs, naïve B cells rapidly proliferate in
response to T cell-dependent antigens and somatically mutate into high-affinity antibody-secreting cells, i.e.,
plasma cells. A significant concern is that with aging, B cells exhibit a decreased expansion of B cells and GC
reaction in response to antigen. However, it is unclear whether this is solely due to immune senescence and a
defect in B cells or the follicular T helper cell (TFH), and whether the lymphoid microenvironment of B cell follicles
plays a role. B cells in young mice assume heterogeneous cell fates upon stimulation, with only a fraction
differentiating into antibody-secreting cells (ASC), however, this phenomenon remains unknown in B cells from
old mice. Notably, plasma cell differentiation in young B cells is controlled by multiple cell division-coupled
epigenetic programs, which also remains understudied in old B cells. Because aged mice cannot generate
sufficient GCs to provide insight into ASC fate and epigenomic remodeling of GC B cells, necessitating the
development of a tissue-engineered model of aged lymphoid tissues. The long-term goals of this R01 are 1) to
develop an ex vivo “aged B cell follicle” organoid technology capable of providing lymphoid microenvironment
signals in a plug-and-play manner to induce early GC programming of aged B cells from mice and human B
cells, therefore enabling the study of plasma cell fate and regulation of the epigenome of B cells; and 2) to
identify checkpoint targets that can be suppressed to boost GC response in aged B cells. PI has
demonstrated that GCs phenotype could be generated in organoids using B cells from >2-yr old mice
when differentiated under young lymphoid microenvironment conditions, however to a lesser extent than
young B cells. However, true differentiation fate of aged B cells ex vivo can only be realized in a
microenvironment representative of old lymph nodes.The R01 is highly significant and innovative because it
will 1) establish lymphoid microenvironment of aged lymph nodes and engineer a hydrogel-based “aged”
immune organoid to study vaccine and infection responses, 2) enable control over the ex vivo B cell
differentiation of aged B cells in ex vivo cultures and generate antigen-specific antibodies against infections,
3) define the cell division kinetics of B cell differentiation and identify the molecular and epigenetic trajectories of
aged B cell fate and ASC formation, and 4) identify checkpoint targets to accelerate GCs in aging.
Public Health Relevance Statement
Research Narrative
Elderly people have a reduced ability towards brisk and sustained responses to new antigens, causes of which
are poorly understood but can be attributed to a defective T cell and B cell interaction. Consequently, animal
models are limited in their ability to generate antibody responses, necessitating the development of a tissue-
engineered model of an aged lymph node. The proposed work will generate aged immune organoids that could
serve as a rapid testing platform to identify non- or poor-responder aged individuals to infectious disease
vaccines.
NIH Spending Category
No NIH Spending Category available.
Project Terms
3-DimensionalAccelerationAdjuvantAffinityAgingAnimal ModelAntibodiesAntibody AffinityAntibody ResponseAntigensAtomic Force MicroscopyB cell differentiationB-LymphocytesBiocompatible MaterialsCDKN1A geneCell AgingCell CommunicationCell Cycle Checkpoint GenesCell divisionCellsChemicalsChromatinCoculture TechniquesCollagenCommunicable DiseasesCoupledDefectDevelopmentElderlyEngineeringEnhancersEpigenetic ProcessExhibitsExtracellular MatrixGene ExpressionGenerationsGenesGenetic TranscriptionGoalsHelper-Inducer T-LymphocyteHomologous GeneHumanHumoral ImmunitiesHydrogelsIRF4 geneImmuneImmunoglobulin Class SwitchingImmunoglobulin Somatic HypermutationImmunoglobulin-Secreting CellsImmunologyInfectionInfluenzaKineticsLifeLymphoidLymphoid TissueLysineMaleimidesMapsMediatingMethylationModelingModificationMolecularMusMutateNatureOrganoidsPersonsPhenotypePlasma CellsPlasma EnhancementPlayPolycombPolyethylene GlycolsPopulationProcessProliferatingProteinsReactionRegulationReportingResearchRoleSignal TransductionStructure of germinal center of lymph nodeT-LymphocyteTechnologyThickTissue EngineeringTissuesUnited States National Institutes of HealthVaccinesWorkagedaging populationcapsulecheckpoint inhibitiondifferential expressiondraining lymph nodeepigenomeepigenomicsextracellularhigh riskhistone modificationimmunosenescenceinnovationinsightlymph nodesmultiple omicsold miceplasma cell differentiationprogramspromoterrapid testingresponsetranscription factortranscriptional reprogrammingtranscriptomevaccine trial
National Institute of Allergy and Infectious Diseases
CFDA Code
855
DUNS Number
097394084
UEI
EMW9FC8J3HN4
Project Start Date
12-July-2024
Project End Date
31-May-2029
Budget Start Date
12-July-2024
Budget End Date
31-May-2025
Project Funding Information for 2024
Total Funding
$771,620
Direct Costs
$514,801
Indirect Costs
$256,819
Year
Funding IC
FY Total Cost by IC
2024
National Institute of Allergy and Infectious Diseases
$771,620
Year
Funding IC
FY Total Cost by IC
Sub Projects
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Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
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