Project Summary
Before the discovery of antibiotics, infectious diseases were the three leading causes of death in the United
States and constituted nearly 50% of the deaths annually. Today only one infectious disease, pneumonia, is
among the top 10 causes of death in the US, largely due to the success of antibiotics in treating bacterial
infections. Unfortunately, the public health benefits provided by antibiotics are at serious risk due to the
emergence of antibiotic resistant bacteria, an inevitable consequence of the evolutionary pressure exerted on
bacteria by these drugs. Eventually the bacterial pathogens we hope to keep at bay will become resistant to all
clinically relevant antibiotics, plunging humans back into a pre-antibiotic world in which infectious disease is the
leading cause of death. Therefore, we need to find innovative, and rapidly implementable, ways to reduce or
supplement antibiotics to preserve their utility in controlling bacterial infections. Many bacterial pathogens,
termed pathobionts, reside within the human microbiota in the absence of disease and only instigate
pathogenesis after disruption of the microbial community driven by abrupt environmental changes such as acute
inflammation. While there is general acceptance that the commensal microbes provide pathogen colonization
resistance and suppression of pathobiont virulence in a healthy state, the mechanistic understanding for how
they provide these benefits is lacking. In this project, we explore using the human microbiome to identify
ecological principles that allow for the design and implementation of microbial communities that suppress
bacterial pathogens. We have selected Clostridioides difficile and extraintestinal pathogenic E. coli (ExPEC) as
the two main pathogens to study as they are deemed antibiotic resistance threats by the CDC and necessitate
millions of antibiotic prescriptions each year. Even with antibiotic treatment, recurrent infections with both of
these pathogens is common, and there is currently a lack of long-lasting preventative strategies. Using a novel
method to simplify human microbiome communities and advanced in vitro human tissue culture and humanized
murine models, we seek to identify key microbial consortia for suppressing these pathogens. We ultimately
expect to optimize a small number of defined microbial communities that can be used to eradicate or prevent
these infections in people.
National Institute of Allergy and Infectious Diseases
CFDA Code
DUNS Number
051113330
UEI
FXKMA43NTV21
Project Start Date
01-March-2021
Project End Date
28-February-2026
Budget Start Date
01-March-2024
Budget End Date
28-February-2025
Project Funding Information for 2024
Total Funding
$535,780
Direct Costs
$342,672
Indirect Costs
$193,108
Year
Funding IC
FY Total Cost by IC
2024
National Institute of Allergy and Infectious Diseases
$535,780
Year
Funding IC
FY Total Cost by IC
Sub Projects
No Sub Projects information available for 5U19AI157981-04 5054
Publications
Publications are associated with projects, but cannot be identified with any particular year of the project or fiscal year of funding. This is due to the continuous and cumulative nature of knowledge generation across the life of a project and the sometimes long and variable publishing timeline. Similarly, for multi-component projects, publications are associated with the parent core project and not with individual sub-projects.
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Patents
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Outcomes
The Project Outcomes shown here are displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed are those of the PI and do not necessarily reflect the views of the National Institutes of Health. NIH has not endorsed the content below.
No Outcomes available for 5U19AI157981-04 5054
Clinical Studies
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News and More
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History
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