PROJECT SUMMARY/ ABSTRACT:
The rise of antibacterial resistance highlights the urgent need to develop new effective strategies to combat
antibiotic-resistant infections. Ubiquitously, Gram-negative bacterial pathogens assemble extracellular fibers,
termed chaperone-usher pathway (CUP) pili, that are critical for the pathogen's ability to cause infections by
recognizing and colonizing different host tissues and habitats. Thus, therapeutics targeting the assembly of
these fibers hold promise in their potential to result in much needed alternatives for the treatment of multidrug-
resistant Gram-negative pathogens. Among these pathogens are those designated as “Urgent Threats”
carbapenem-resistant Acinetobacter and carbapenem-resistant Enterobacteriaceae (CRE), as well as “Serious
Threats” drug-resistant Campylobacter, extended-spectrum beta-lactamase (ESBL)-producing
Enterobacteriaceae, multidrug-resistant Pseudomonas aeruginosa, drug-resistant Salmonella, Shigella, and
Bordetella pertussis. In each CUP pilus system, a designated periplasmic chaperone and an outer-membrane
(OM) usher protein work together to assemble thousands of structural subunits into each final pilus structure.
Most CUP pili are also tipped by adhesins that specifically recognize receptors in host tissues. We have made
considerable progress towards understanding the remarkably complex mechanisms of pilus assembly. Building
on our extensive experience and expertise in CUP pilus biogenesis and in the development of rational
therapies targeting CUP pili, this proposal seeks to develop novel antibiotic-sparing therapies targeting the OM
ushers using multidisciplinary approaches including bacteriology, chemical biology, medicinal chemistry,
structural biology and immunology. Based on the structural characterizations and the dynamic nature of these
multi-domain usher proteins, we will rationally develop small molecule usher inhibitors and pore openers by
trapping specific conformational states (Aim 1). Usher inhibitors will disarm bacterial virulence factors, whereas
pore openers will increase permeability of existing antibiotics into bacterial outer membranes. In addition, we
will develop monoclonal antibodies that inactivate usher, thus preventing pilus biogenesis and infection (Aim
2). While our first two aims will concentrate on two of the most studied pilus systems (type 1 and P pili), Aim 3
will expand our studies of ushers in Acinetobacter, Campylobacter, P. aeruginosa, Salmonella, Shigella, and B.
pertussis. Collectively, we plan to develop rational therapies against multiple antibiotic-resistant Gram-negative
bacterial pathogens. These developments, together with other novel strategies proposed in our
multidisciplinary U19 program, will work synergistically to act as efficient antibiotic-sparing therapeutics by
blocking usher and adhesin functions. Moreover, the usher pore openers developed in this proposal will
increase OM permeability, further alleviating antibiotic resistance in Gram-negative pathogens and allowing us
to repurpose existing drugs to enhance the current antibiotic arsenal. Thus, successful developments in these
directions will be potentially transformative in combating antibiotic resistance.
National Institute of Allergy and Infectious Diseases
CFDA Code
DUNS Number
068552207
UEI
L6NFUM28LQM5
Project Start Date
01-March-2021
Project End Date
28-February-2026
Budget Start Date
01-March-2024
Budget End Date
28-February-2025
Project Funding Information for 2024
Total Funding
$368,967
Direct Costs
$288,887
Indirect Costs
$80,080
Year
Funding IC
FY Total Cost by IC
2024
National Institute of Allergy and Infectious Diseases
$368,967
Year
Funding IC
FY Total Cost by IC
Sub Projects
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